| CArrayScale | |
| CbuttonBox | |
| CCoilSensitivity | |
| CComplexData | |
| CcomplexfloatBox1D | |
| CConverter | |
| CCoordTransformation | |
| CcorrelationResult | |
| CCurve4Qwt | |
| CData | |
| CDownhillSimplex | |
| CenumBox | |
| CEvent | |
| CeventContext | |
| CExponentialFunction | |
| CExponentialFunctionWithOffset | |
| CFileFormat | |
| CFileIO | |
| CFileReadOpts | |
| CFileWriteOpts | |
| CFilterChain | |
| CFilterNaN | |
| CFilterStep | |
| Cfitpar | |
| CfloatBox1D | |
| CfloatBox3D | |
| CfloatLabel2D | |
| CfloatLineBox | |
| CfloatLineBox3D | |
| CfloatLineEdit | |
| CfloatScientSlider | |
| CfloatSlider | |
| CfmriResult | |
| CFunctionFitDerivative | |
| CFunctionFitDownhillSimplex | |
| CFunctionFitInterface | |
| CFunctionIntegral | |
| CGammaVariateFunction | |
| CGaussianFunction | |
| CGeometry | Geometry Settings |
| CGridding | |
| CGriddingPoint | |
| CGuiApplication | |
| CGuiButton | |
| CGuiComboBox | |
| CGuiDialog | |
| CGuiGridLayout | |
| CGuiImage | |
| CGuiLineEdit | |
| CGuiListItem | |
| CGuiListView | |
| CGuiMainWindow | |
| CGuiPainter | |
| CGuiPlot | |
| CGuiPopupMenu | |
| CGuiPrinter | |
| CGuiProgressBar | |
| CGuiProgressDialog | |
| CGuiProps | |
| CGuiScroll | |
| CGuiScrollBar | |
| CGuiSlider | |
| CGuiTextView | |
| CGuiToolBar | |
| CGuiToolButton | |
| CGuiWheel | |
| CImage | |
| CImageSet | |
| CIntegrand | |
| CintLineBox | |
| CintLineEdit | |
| CintScientSlider | |
| CJcampDxProps | |
| Ckspace_coord | |
| CkSpaceCoord | |
| CLabeled | |
| CLDRaction | |
| CLDRarray | |
| CLDRbase | |
| CLDRblock | |
| CLDRbool | |
| CLDRcomp | |
| CLDRenum | |
| CLDRfileName | |
| CLDRfilter | |
| CLDRformula | |
| CLDRkSpaceCoords | |
| CLDRnumber | |
| CLDRrecoValList | |
| CLDRserBase | |
| CLDRserJDX | |
| CLDRserXML | |
| CLDRshape | |
| CLDRstring | |
| CLDRtrajectory | |
| CLDRtriple | |
| CLDRwidget | |
| CLinearFunction | |
| CList | |
| CLockProxy | |
| CLog | |
| CLogBase | |
| CLogMessage | |
| CMarker4Qwt | |
| CMinimizationFunction | |
| CModelFunction | |
| CMutex | |
| CMutexLock | |
| Cndim | |
| CNuclei | |
| COdinMethod | |
| COdinMethodCallback | |
| COdinPulse | Advandced RF pulses |
| COdinQt | |
| CPixmapProps | |
| CPlatformRegistration | |
| CPolynomialFunction | |
| CProcess | |
| CProfiler | |
| CprogramContext | |
| CProgressDisplayDriver | |
| CProgressMeter | |
| CProtocol | Protocol proxy |
| CqueryContext | |
| CRandomDist | |
| CRank | |
| CRecoAdcBaseline | adc_baseline: Baseline correction of ADCs |
| CRecoAdcGridPrep | adc_gridprep: Prepare ADC for gridding (ramp sampling) |
| CRecoAdcPad | adc_pad: Pad missing points by zeroes |
| CRecoAdcReflect | adc_reflect: Reflect ADC if recoReflectBit is set |
| CRecoAdcWeight | adc_weight: Weight ADC using weightVec |
| CRecoB1Fit | b1fit: B1-mapping method based on: Fast, Accurate, and Precise Mapping of the RF Field In Vivo Using the 180 Signal Null. Dowell et al., Magn Reson Med 58 (2007) |
| CRecoBlackBoard | |
| CRecoBladeComb | bladecomb: Pre-processing of PROPELLER blades: coordinate rotation for gridding |
| CRecoBladeCorr | bladecorr: Pre-processing of PROPELLER blades: phase correction |
| CRecoBladeGrid | gridblade: grid kspace center of single blades |
| CRecoChannelSum | chansum: Combine images from different channels |
| CRecoCircMask | circmask: Cut out central circular region |
| CRecoCollector | averagecoll, chancoll, chanrepcoll, chanrepslicecoll, cyclecoll, driftcoll, echocoll, freqcoll, image, kspace, line3dcoll, repcoll, slicecoll, tecoll, usercoll: Collect data in one or more dimensions |
| CRecoCollectorBase | |
| CRecoConjPhaseFT | conjphase: Discrete Fourier transform with conjugate-phase correction according to field map |
| CRecoController | |
| CRecoCoord | |
| CRecoCycleRot | cyclerot: In-plane rotation according to cycle index |
| CRecoData | |
| CRecoDeapodize | deapodize1d, deapodize2d: De-apodize gridded data in 2 dimensions |
| CRecoDebug | debug: Write messages to log |
| CRecoDim | |
| CRecoDriftCalc | driftcalc: Calculate field drift for each repetition |
| CRecoDriftCorr | driftcorr: Correct for linear field drift over repetitions |
| CRecoDTI | dti: DTI preprocessing |
| CRecoDump | dump: Dump current data in reconstruction pipeline |
| CRecoEpiNavCorr | epinavcorr: Apply Siemens EPI phase correction |
| CRecoEpiNavScan | epinavscan: Calculate and post data for Siemens EPI phase correction |
| CRecoExpFit | expfit: Fit exponential decay constant using x-values associated with 'userdef' dimension |
| CRecoFFT | fft: Fast Fourier Transform |
| CRecoFieldMap | fieldmap: Calculate fieldmap |
| CRecoFilter | filter: Lowpass filter in k-space with plateau at the center |
| CRecoFMRI | fmri: Simple fMRI analysis for fMRI localizer |
| CRecoFreqComb | freqcomb: Combine multi-frequency images using fieldmap |
| CRecoGrappa | grappa, grappa3d: Perform GRAPPA interpolation in dimension 'line3d' |
| CRecoGrappaWeights | grappaweights, grappaweights3d, grappaweightstempl, grappaweightstempl3d: Calculate GRAPPA weights in dimension 'line3d' and post them on the blackboard with the label 'grappaweights_line3d' |
| CRecoGrid | grid1d, grid2d: Grid signal data with arbitrary k-space trajectory in 2 dimensions |
| CRecoGridCut | gridcut: Cut out central part of image to remove effects from gridding on a denser grid |
| CRecoHalfFour | halffour: Mirror k-space of half-Fourier acquisition |
| CRecoHomodyne | homodyne: Homodyne reconstruction of partial Fourier data |
| CRecoIndex | |
| CRecoMagn | magn: Only take magnitude and set phase to zero |
| CRecoMeasIndex | |
| CRecoMesser | messer: Postprocessing for MESSER sequence |
| CRecoMip | mip: Maximum intensity projection in slice direction |
| CRecoMultiFreq | multifreq: Generate multi-frequency ADCs based on fieldmap |
| CRecoOffset | offset: Create phase gradient in k-space so that image is shifted after FFT |
| CRecoOversampling | oversampling: Remove oversampling in readout direction in image domain |
| CRecoPars | |
| CRecoPhaseCorr | phasecorr: Apply echo-by-echo phase correction |
| CRecoPhaseCourse | phasecourse: Combine phase timecourse from multi-channel data |
| CRecoPhaseMap | phasemap: Calculate and post phasemap for echo-by-echo phase correction |
| CRecoPilot | pilot: Modify geometry for pilot output |
| CRecoPost | post: Post data on blackboard |
| CRecoQualityControlSpike | qcspike: Check for spikes in data |
| CRecoQueryContext | |
| CRecoReaderCustom | |
| CRecoReaderInterface | |
| CRecoReaderOdin | |
| CRecoReal | real: Throw away imaginary part of data and keep only real part |
| CRecoRefGain | refgain: Calculate reference gain (Bruker) |
| CRecoSliceTime | slicetime: Slice-time correction for data with multiple repetitions |
| CRecoSlidingWindow | slidingwindow: Generate sliding window data |
| CRecoSplitter | chansplit, repsplit: Split data in one or more dimensions |
| CRecoStep | |
| CRecoStore | store: Store reconstructed images |
| CRecoSum | averagesum, cyclesum, repmagnsum, repsum: Sum up data in one or more dimensions |
| CRecoSwi | swi: Susceptibility weighted imaging |
| CRecoSwitch | switch: Branch off different flows through reconstruction pipeline |
| CRecoT1Fit | t1fit: Calculate T1 relaxation time using data from Look-Locker sequence |
| CRecoValList | |
| CRecoZeroFill | zerofill: Fill k-space with zeroes to match matrix size of protocol |
| CRotMatrix | Rotation Matrix |
| CSample | Virtual Sample for Simulation |
| CSeqAcq | Acquisition |
| CSeqAcqDeph | Pre-read dephasing |
| CSeqAcqDriver | |
| CSeqAcqEPI | Acquisition + echo-planar imaging readout |
| CSeqAcqInterface | |
| CSeqAcqRead | Acquisition + readout gradient |
| CSeqAcqSpiral | Acquisition + spiral gradient |
| CSeqBlSiegPrep | Bloch-Siegert preparation module for B1-mapping |
| CSeqClass | |
| CSeqCmdLine | |
| CSeqCounter | |
| CSeqCounterDriver | |
| CSeqDecoupling | Decoupling period |
| CSeqDecouplingDriver | |
| CSeqDelay | Timing delay |
| CSeqDelayDriver | |
| CSeqDelayVecDriver | |
| CSeqDelayVector | Vector of variable timing delays |
| CSeqDiffWeight | Diffusion Weighting |
| CSeqDiffWeightFlowComp | Flow-Compensated Diffusion Weighting |
| CSeqDriverInterface | |
| CSeqDur | |
| CSeqEpiDriver | |
| CSeqEpiDriverDefault | |
| CSeqFieldMap | Multi-echo module for field-map pre-scan |
| CSeqFlipAngVector | |
| CSeqFreqChan | |
| CSeqFreqChanDriver | |
| CSeqFreqChanInterface | |
| CSeqGradChan | |
| CSeqGradChanDriver | |
| CSeqGradChanList | |
| CSeqGradChanParallel | |
| CSeqGradChanParallelDriver | |
| CSeqGradConst | Constant gradient |
| CSeqGradConstPulse | Constant gradient pulse |
| CSeqGradDelay | Gradient delay |
| CSeqGradEcho | Gradient echo module |
| CSeqGradInterface | |
| CSeqGradObjInterface | |
| CSeqGradPhaseEnc | Phase Encoding |
| CSeqGradPhaseEncFlowComp | Flow-Compensated Phase Encoding |
| CSeqGradRamp | Gradient Ramp |
| CSeqGradSpiral | |
| CSeqGradTrapez | Trapezoidal gradient |
| CSeqGradTrapezDefault | |
| CSeqGradTrapezDriver | |
| CSeqGradTrapezParallel | 3 simultaneous trapezoids |
| CSeqGradVector | Vector of constant gradients |
| CSeqGradVectorPulse | Vector of gradient pulses |
| CSeqGradWave | Gradient Waveform |
| CSeqHalt | Input trigger |
| CSeqListDriver | |
| CSeqMagnReset | Magnetization reset |
| CSeqMakefile | |
| CSeqMethod | Base class for methods (sequences) |
| CSeqMethodProxy | |
| CSeqObjBase | |
| CSeqObjList | Container for sequence objects |
| CSeqObjLoop | Sequence Loop |
| CSeqObjVector | Vector to loop over sequence objects |
| CSeqOperator | |
| CSeqParallel | |
| CSeqParallelDriver | |
| CSeqPars | Sequence Parameter proxy |
| CSeqPhaseDriver | |
| CSeqPhaseListVector | |
| CSeqPlatform | |
| CSeqPlatformInstances | |
| CSeqPlatformProxy | |
| CSeqPlotDataAbstract | |
| CSeqPuls | RF pulse |
| CSeqPulsar | Pulsar pulses, combines OdinPulse and SeqPulsNdim |
| CSeqPulsarBP | Const pulse |
| CSeqPulsarGauss | Gauss pulse |
| CSeqPulsarReph | Post-pulse rephaser |
| CSeqPulsarSat | Saturation pulse |
| CSeqPulsarSinc | Sinc pulse |
| CSeqPulsDriver | |
| CSeqPulsInterface | |
| CSeqPulsNdim | RF Pulse + gradients |
| CSeqReorderVector | |
| CSeqRotMatrixVector | Vector of SeqRotMatrix's |
| CSeqSat | Saturation pulse + spoilers |
| CSeqSimAbstract | |
| CSeqSimInterval | Time interval for simulation |
| CSeqSimMagsi | MAGSI-based Magnetization Simulator |
| CSeqSimultanVector | |
| CSeqSnapshot | Magnetization snapshot |
| CSeqTimecourseData | |
| CSeqTreeCallbackAbstract | |
| CSeqTreeObj | |
| CSeqTrigger | Output trigger |
| CSeqTriggerDriver | |
| CSeqValList | |
| CSeqVecIter | Iterator for vectors |
| CSeqVector | |
| CSingletonHandler | |
| CSinusFunction | |
| CSlotDispatcher | |
| CStaticHandler | |
| CstatisticResult | |
| CStep | |
| CStepFactory | |
| CstringBox | |
| CStudy | Study information |
| Csvector | |
| CSystem | System proxy |
| CSystemInterface | |
| CThread | |
| CThreadedLoop | |
| CTimecourseMarker4Qwt | |
| Ctjarray | |
| Ctjvector | |
| CTypeTraits | |
| CUInt | |
| CUniqueIndex | |
| CUnitTest | |
| CValList | |
