Steps(functors) of the reconstruction framework (odinreco)


Classes

class  RecoAdcBaseline
 adc_baseline: Baseline correction of ADCs More...
class  RecoAdcReflect
 adc_reflect: Reflect ADC if recoReflectBit is set More...
class  RecoAdcRegrid
 adc_regrid: Regrid ADC using regridMatrix More...
class  RecoAdcWeight
 adc_weight: Weight ADC using weightVec More...
class  RecoB1Fit
 b1fit: B1-mapping method based on: Fast, Accurate, and Precise Mapping of the RF Field In Vivo Using the 180 Signal Null. Dowell et al., Magn Reson Med 58 (2007). More...
class  RecoBaselineCorr
 baseline: Baseline correction in image domain More...
class  RecoChannelSum
 chansum: Combine images from different channels More...
class  RecoCollector< Nin, In, Ncoll, Coll, Extra >
 averagecoll, chancoll, cyclecoll, image, kspace, line3dcoll, phasemapcoll, repcoll, slicecoll, tecoll, usercoll: Collect data in one or more dimensions More...
class  RecoConjPhaseFT
 conjphase: Discrete Fourier transform with conjugate-phase correction according to field map More...
class  RecoDeapodize
 deapodize: De-apodize gridded data More...
class  RecoFFT
 fft: Fast Fourier Transform More...
class  RecoFieldMap
 fieldmap: Calculate fieldmap More...
class  RecoFilter
 filter: Lowpass filter in k-space with plateau at the center More...
class  RecoFreqComb
 freqcomb: Combine multi-frequency images using fieldmap More...
class  RecoGrappa
 grappa: Perform GRAPPA interpolation More...
class  RecoGrappaWeights
 grappaweights: Calculate GRAPPA weights and post them with the label 'grappaweights' on the blackboard. More...
class  RecoGrid
 grid: Grid signal data with arbitrary k-space trajectory More...
class  RecoHomodyne
 homodyne: Homodyne reconstruction of partial Fourier data More...
class  RecoInterpolate
 interpolate: Re-calculate data by polynomial interpolation More...
class  RecoMesser
 messer: Postprocessing for MESSER sequence More...
class  RecoMip
 mip: Maximum intensity projection in slice direction More...
class  RecoMultiFreq
 multifreq: Generate multi-frequency ADCs based on fieldmap More...
class  RecoOffset
 offset: Create phase gradient in k-space so that image is shifted after FFT More...
class  RecoOversampling
 oversampling: Remove oversampling in readout direction in image domain More...
class  RecoPhaseCorr< hasPrescan >
 epiprescancorr, phasecorr: Apply echo-by-echo phase correction More...
class  RecoPhaseMap< hasPrescan >
 epiprescanmap, phasemap: Calculate and post phasemap for echo-by-echo phase correction More...
class  RecoPilot
 pilot: Modify geometry for pilot output More...
class  RecoPost
 post: Post data on blackboard More...
class  RecoRefGain
 refgain: Calculate reference gain (Bruker) More...
class  RecoScale
 scale: Scale and reverse image More...
class  RecoSliceTime
 slicetime: Slice-time correction for data with multiple repetitions More...
class  RecoSplitter< Nunmod, Unmod, Nsplit, Split >
 chansplit: Split data in one or more dimensions More...
class  RecoStore
 store: Store reconstructed images More...
class  RecoSum< Nunmod, Unmod, Nsum, Sum >
 averagesum, cyclesum, repsum: Sum up data in one or more dimensions More...
class  RecoSwi
 swi: Susceptibility weighted imaging More...
class  RecoSwitch
 switch: Branch off different flows through reconstruction pipeline More...
class  RecoT1Fit
 t1fit: Calculate T1 relaxation time using data from Look-Locker sequence More...
class  RecoT2Fit
 t2fit: Calculate T2 relaxation time using data with different TEs More...
class  RecoVerve
 verve: Postprocessing for VERVE sequence More...
class  RecoZeroFill
 zerofill: Fill k-space with zeroes to match matrix size of protocol More...

Detailed Description

These steps(functors) can be used within the ODIN reconstruction framework (odinreco)
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